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Mathematical and Engineering Minds Driving Cutting-Edge Breakthroughs

PhD Student Research Spotlights

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Enumerative Combinatorics of Phylogenetic Trees
 

PhD Student: Chloe Shiff
Advisor: Noah Rosenberg
Focus Area: Mathematical Biology
Publication: Research Poster

Risk Control for Large Language Models


PhD Student: Catherine Chen
Advisor: Lihua Lei
Focus Area: Computational Mathematics
Publication: Research Poster

Modeling of Sleep and Circadian Rhythms


PhD Student: Adrien Specht
Advisor: Emmanuel Mignot
Focus Area: Computational Biology
Publication: Research Poster

Optimality of First-Order Debiasing in Functional Estimation


PhD Student: Jikai Jin
Advisor: Vasilis Syrgkanis
Focus Area: Causal Inference, Causal Machine Learning
Publication: Research Poster
 

Evaluating Genetic Engineering Trade-offs Through Whole-cell Modeling of Escherichia coli

PhD Student: Riley Juenemann
Advisor: Markus Covert
Focus Area: Computational Biology
Publication: Research Poster

Analyzing Labor Market Dynamics, Individual Careers, & Gender Disparities Using Big Data & Computational Methods

PhD Student: Tianyu Du
Advisor: Susan Athey
Focus Area: Computational Social Sciences
Publication: Research Poster

Machine Learning Methods for Studying the Nonregulatory Genomics of the Human Heart
 

PhD Student: Salil Deshpande
Advisor: Anshul Kundaje
Focus Area: Computational Biology

Sensor Localization Using Neural Networks
 

PhD Student: Jennifer Zheng
Advisor: George Papanicolaou
Focus Area: 
Publication: Research Poster

Matrix Sketching for Online Analysis of LCLS Imaging Datasets
 

PhD Student: John Winnicki
Advisor: Eric Darve
Focus Area: 
Publication: Research Poster

Neural Network Surrogates for Patient-Specific Cardiac Electrophysiology Models
 

PhD Student: Elena Sabdy Martinez
Advisor: Alison Marsden
Focus Area: Computational Biology
Publication: Research Poster

Accelerating Diffusion Models with Parallel Sampling: Inference at Sub-Linear Time Complexity
 

PhD Student: Haoxuan Chen
Advisor: Lexing Ying
Focus Area: Computational Mathematics
Publication: Research Poster

Leveraging Computer Graphics Techniques for Geometric Deformations of Cardiovascular Anatomy
 

PhD Student: Jeff Li
Advisor: Alison Marsden
Focus Area: Computational Biology
Publication: Research Poster

 

STRUCT a Statistical Approach to Identify RNA Secondary Structures from Raw Sequencing Data, Bypassing Multiple Sequence Alignment
 

PhD Student: Julie Wang
Advisor: Julia Salzman
Focus Area: Computational Biology
Publications: Research Poster

Efficient Optimization and Simulation Procedures for Rare Event Probabilities in Power Systems
 

PhD Student: Anish Senapati
Advisor: Jose Blanchet
Focus Area: Computational Mathematics
Publication: Research Poster

How Discrete and Continuous Diffusion Meet: Analysis of Discrete Diffusion Models via a Stochastic Integral Framework
 

PhD Student: Yinuo Ren
Advisor: Lexing Ying & Grant Roskoff
Focus Area: Computational Mathematics
Publication: Research Poster

A Meta-learner for Heterogeneous Effects in Difference-in-Differences. 
 

PhD Student: Hui Lan
Advisor: Vasilis Syrgkanis
Focus Area: Causal Inference, Causal Machine Learning

 

Can Transformers Solve Least Squares to High Precision?
 

PhD Student: Jerry Liu
Advisor: Chris Re
Focus Area: Computational Math
Publications: Research Poster
 

Wasserstein Distributionally Regret Optimization
 

PhD Student: Lukas Fiechtner
Advisor: Jose Blanchet
Focus Area: Computational Finance
Publication: Research Poster

Deep Learning for Optimal MBS Investment
 

PhD Student: Adam Rebei
Advisor: Kay Giesecke & Markus Pelger
Focus Area: Computational Finance
Publication: Research Poster

Data Driven Excess Risk Bounds: Circumventing the Need to Analyze Class Complexity

PhD Student: Anna Lyubarskaja
Advisor: Susan Athey
Focus Area: Computational math
Publication: Research Poster

Basis Statistics for Phylogenetic Tree Balance
 

PhD Student: Daniel Bauman
Advisor: Noah Rosenberg
Focus Area: Computational Biology
Publication: Research Poster

PhyloSMC: Fast, Parallel Bayesian Phylogenetics
 

PhD Student: Ivan Specht
Advisor: Julia Palacios
Focus Area: Computational Phylogenetics
Publication: Research Poster

Discovering Hierarchical Latent Capabilities of Language Models via Causal Representation Learning
 

PhD Student: Jikai Jin
Advisor: Vasilis Syrgkanis
Focus Area: Causal Representation Learning
Publication: Research Poster

Approximation of High-Dimensional Gibbs Distributions with Functional Hierarchical Tensors
 

PhD Student: Nan Sheng
Advisor: Lexing Ying
Focus Area: Computational Mathematics
Publication: Research Poster

Integrating Intra- and Inter-Cell Gene-Gene Interactions via Dual-Branch Transformers for Single-Cell Omics Analysis
 

PhD Student: Qingyue Wei
Advisor: Lei Xing
Focus Area: Computational Biology
Publication: Research Poster

ML-OpenAPS Hybrid Modeling: Optimizing Physiological Parameters in Mechanistic Models for Forecasting Glucose in Individuals with Type 1 Diabetes Under an Unknown Insulin-Delivery Controller
 

PhD Student: Rachel Guo
Advisor: Ramesh Johari
Focus Area: Computational Biology
Publication: Research Poster

Sampling on Metric Graphs
 

PhD Student: Rajat Dwaraknath
Advisor: Lexing Ying
Focus Area: Computational Mathematics
Publication: Research Poster

Gradient Methods with Online Scaling
 

PhD Student: Wenzhi Gao
Advisor: Madeleine Udell
Focus Area: Operations Research
Publication: Research Poster

LLM Decision Making: Uncertainty Quantification with Conformal Prediction
 

PhD Student: Xinmeng Zeng
Advisor: Marco Pavone
Focus Area: Uncertainty Quantification
Publication: Research Poster

Matrix-Based Distance Metrics and Statistical Summaries of Labeled Evolutionary Trees
 

PhD Student: Yi-Ting Tsai
Advisor: Julia Palacios
Focus Area: Computational Biology
Publication: Research Poster